Transcript: MIR2052HG:1

Basic information

LNCipedia transcript ID: MIR2052HG:1 
HGNC Gene Symbol: MIR2052HG    
HGNC Full Gene Name: MIR2052 host gene
Ensembl Gene ID: ENSG00000254349
Ensembl Transcript ID: ENST00000518190
Location (hg19): chr8:75512010-75615914
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 531 bp
Exons: 6
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000518190.4
Alternative gene names: ENSG00000254349.5; MIR2052HG;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -262.9386 non-coding 
CPAT coding probability 9.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR2052HG:1 no no no no

Available literature

  1. Ingle (2016), Genetic Polymorphisms in the Long Noncoding RNA MIR2052HG Offer a Pharmacogenomic Basis for the Response of Breast Cancer Patients to Aromatase Inhibitor Therapy., Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 MIR2052HG:1
4.1 MIR2052HG:1
5.0 MIR2052HG:1
5.1 MIR2052HG:1
5.2 MIR2052HG:1