Transcript: MIR29B2CHG:81

Basic information

LNCipedia transcript ID: MIR29B2CHG:81 
LNCipedia gene ID: MIR29B2CHG
Location (hg19): chr1:207968836-207997257
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 21452 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000203709.5|MICT00000029391.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.682 non-coding 
CPAT coding probability 4.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR29B2CHG:81 yes no no no

Available literature

  1. Ota (2004), Complete sequencing and characterization of 21,243 full-length human cDNAs., Nat. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C1orf132-1:38
5.0 lnc-C1orf132-1:38
5.1 MIR29B2CHG:34
5.2 MIR29B2CHG:81