Transcript: MIR3150BHG:6

Basic information

LNCipedia transcript ID: MIR3150BHG:6 
HGNC Gene Symbol: MIR3150BHG    
HGNC Full Gene Name: MIR3150B host gene
Ensembl Gene ID: ENSG00000245080
Ensembl Transcript ID: ENST00000501164
RefSeq ID: NR_132987
Location (hg19): chr8:96079036-96085148
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2632 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000501164; ENST00000501164.2; RP11-320N21.1-001; OTTHUMT00000379662.2; NONHSAT127818; NR_132987.1
Alternative gene names: ENSG00000245080; RP11-320N21.1; ENSG00000245080.3; OTTHUMG00000164658.3; ENSG00000245080.4; MIR3150A; ENSG00000245080.5; ENSG00000245080.6; MIR3150B; ENSG00000245080.7; AC068189.1; LOC105375650; MIR3150BHG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.9955 non-coding 
CPAT coding probability 10.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR3150BHG:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TP53INP1-1:2
3.1 lnc-TP53INP1-1:2
4.0 lnc-TP53INP1-1:2
4.1 lnc-TP53INP1-1:2
5.0 lnc-TP53INP1-1:2
5.1 MIR3150BHG:4
5.2 MIR3150BHG:6