Transcript: MIR3976HG:1

Basic information

LNCipedia transcript ID: MIR3976HG:1 
LNCipedia gene ID: MIR3976HG
Location (hg19): chr18:5747140-5795900
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2192 bp
Exons: 10
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT057086; FPKM1_group_13569_transcript_1
Alternative gene names: LINC01469


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.9746 non-coding 
CPAT coding probability 4.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR3976HG:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP001496.1-8:12
4.0 MIR3976HG:1
4.1 MIR3976HG:1
5.0 MIR3976HG:1
5.1 MIR3976HG:1
5.2 MIR3976HG:1