Transcript: MIR3976HG:12

Basic information

LNCipedia transcript ID: MIR3976HG:12 
LNCipedia gene ID: MIR3976HG
Location (hg19): chr18:5758295-5795812
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 692 bp
Exons: 6
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026268; NONHSAT057096
Alternative gene names: XLOC_012616; linc-ARHGAP28-4; LINC01469


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.9746 non-coding 
CPAT coding probability 3.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR3976HG:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AP001496.1-2:8
3.1 lnc-AP001496.1-8:10
4.0 MIR3976HG:12
4.1 MIR3976HG:12
5.0 MIR3976HG:12
5.1 MIR3976HG:12
5.2 MIR3976HG:12