Transcript: MIR4290HG:1

Basic information

LNCipedia transcript ID: MIR4290HG:1 
HGNC Gene Symbol: MIR4290HG    
HGNC Full Gene Name: MIR4290 host gene
Ensembl Gene ID: ENSG00000227555
Ensembl Transcript ID: ENST00000426593
RefSeq ID: NR_038882
Location (hg19): chr9:92782936-92803781
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2720 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000426593; ENST00000426593.1; RP11-406A20.4-001; OTTHUMT00000053006.1; NONHSAT132990; NR_038882; NR_038882.1
Alternative gene names: ENSG00000227555; RP11-406A20.4; ENSG00000227555.1; OTTHUMG00000020191.1; MIR4290HG;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.9964 non-coding 
CPAT coding probability 5.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR4290HG:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DIRAS2-4:1
3.1 lnc-DIRAS2-4:1
4.0 MIR4290HG:1
4.1 MIR4290HG:1
5.0 MIR4290HG:1
5.1 MIR4290HG:1
5.2 MIR4290HG:1