Transcript: MIR4500HG:8

Basic information

LNCipedia transcript ID: MIR4500HG:8 
HGNC Gene Symbol: MIR4500HG    
HGNC Full Gene Name: MIR4500 host gene
Ensembl Gene ID: ENSG00000228824
Ensembl Transcript ID: ENST00000450888
Location (hg19): chr13:88079469-88113224
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 576 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000450888.2; ENST00000450888.6
Alternative gene names: ENSG00000228824.2; MIR4500HG; ENSG00000228824.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -192.2693 non-coding 
CPAT coding probability 5.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR4500HG:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLITRK6-9:8
4.0 MIR4500HG:8
4.1 MIR4500HG:8
5.0 MIR4500HG:8
5.1 MIR4500HG:8
5.2 MIR4500HG:8