Transcript: MIR4527HG:30

Basic information

LNCipedia transcript ID: MIR4527HG:30 
HGNC Gene Symbol: MIR4527HG    
HGNC Full Gene Name: MIR4527 host gene
Ensembl Gene ID: ENSG00000267761
Ensembl Transcript ID: ENST00000598649
Location (hg19): chr18:44812096-45101104
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 329 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT059160; ENST00000598649.1
Alternative gene names: ENSG00000267761.2; CTD-2130O13.1; ENSG00000267761.3; MIR4527HG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -372.895 non-coding 
CPAT coding probability 23.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR4527HG:30 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KATNAL2-3:3
4.0 lnc-KATNAL2-3:3
4.1 lnc-KATNAL2-3:3
5.0 lnc-KATNAL2-3:3
5.1 MIR4527HG:14
5.2 MIR4527HG:30