Transcript: MIR503HG:6

Basic information

LNCipedia transcript ID: MIR503HG:6 
LNCipedia gene ID: MIR503HG
RefSeq ID: NR_024607
Location (hg19): chrX:133677407-133680660
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 786 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT138623; NR_024607; NR_024607.1
Alternative gene names: MGC16121; H19X; MIR503HG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.997 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR503HG:6 no no no no

Available literature

  1. Muys (2016), Placenta-Enriched LincRNAs MIR503HG and LINC00629 Decrease Migration and Invasion Potential of JEG-3 Cell Line., PLoS ONE
  2. Fiedler (2015), Development of Long Noncoding RNA-Based Strategies to Modulate Tissue Vascularization., J. Am. Coll. Cardiol.
  3. Necsulea (2014), The evolution of lncRNA repertoires and expression patterns in tetrapods., Nature


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLAC1-1:7
4.0 MIR503HG:6
4.1 MIR503HG:6
5.0 MIR503HG:6
5.1 MIR503HG:6
5.2 MIR503HG:6