Transcript: MIR600HG:2

Basic information

LNCipedia transcript ID: MIR600HG:2 
LNCipedia gene ID: MIR600HG
Location (hg19): chr9:125874493-125879825
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5222 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT134620
Alternative gene names: GL012; FLJ22161


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.3977 non-coding 
CPAT coding probability 70.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MIR600HG:2 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STRBP-1:5
4.0 MIR600HG:2
4.1 MIR600HG:2
5.0 MIR600HG:2
5.1 MIR600HG:2
5.2 MIR600HG:2