Transcript: MIR646HG:10

Basic information

LNCipedia transcript ID: MIR646HG:10 
LNCipedia gene ID: MIR646HG
Location (hg19): chr20:58662942-58676395
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1699 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT080641
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.3247 non-coding 
CPAT coding probability 1.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR646HG:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C20orf197-3:20
4.0 MIR646HG:10
4.1 MIR646HG:10
5.0 MIR646HG:10
5.1 MIR646HG:10
5.2 MIR646HG:10