Transcript: MIS18A-AS1:3

Basic information

LNCipedia transcript ID: MIS18A-AS1:3 
LNCipedia gene ID: MIS18A-AS1
Location (hg19): chr21:33651516-33657013
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5498 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000055909.1|HBMT00000919580.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.3992 non-coding 
CPAT coding probability 8.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIS18A-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 MIS18A-AS1:3
5.0 MIS18A-AS1:3
5.1 MIS18A-AS1:3
5.2 MIS18A-AS1:3