Transcript: MLIP-IT1:1

Basic information

LNCipedia transcript ID: MLIP-IT1:1 
HGNC Gene Symbol: MLIP-IT1    
HGNC Full Gene Name: MLIP intronic transcript 1
Ensembl Gene ID: ENSG00000236996
Ensembl Transcript ID: ENST00000441845
RefSeq ID: NR_046832
Location (hg19): chr6:53863688-53871950
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 643 bp
Exons: 4
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00011316; ENST00000441845.1; MLIP-IT1-001; OTTHUMT00000040978.1; NONHSAT113208; NR_046832; NR_046832.1
Alternative gene names: XLOC_005329; linc-C6orf142-1; ENSG00000236996.1; MLIP-IT1; OTTHUMG00000014890.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -883.6673 non-coding 
CPAT coding probability 1.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MLIP-IT1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LRRC1-1:1
3.1 lnc-LRRC1-2:1
4.0 MLIP-IT1:1
4.1 MLIP-IT1:1
5.0 MLIP-IT1:1
5.1 MLIP-IT1:1
5.2 MLIP-IT1:1