Transcript: MRPL23-AS1:3

Basic information

LNCipedia transcript ID: MRPL23-AS1:3 
HGNC Gene Symbol: MRPL23-AS1    
HGNC Full Gene Name: MRPL23 antisense RNA 1
Ensembl Gene ID: ENSG00000226416
Ensembl Transcript ID: ENST00000419080
Location (hg19): chr11:2004467-2011150
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1876 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000419080.1; MRPL23-AS1-001; OTTHUMT00000034755.2
Alternative gene names: ENSG00000226416.1; MRPL23-AS1; OTTHUMG00000012474.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.3239 non-coding 
CPAT coding probability 51.21% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MRPL23-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C11orf89-1:1
4.0 MRPL23-AS1:3
4.1 MRPL23-AS1:3
5.0 MRPL23-AS1:3
5.1 MRPL23-AS1:3
5.2 MRPL23-AS1:3