Transcript: MYOSLID:10

Basic information

LNCipedia transcript ID: MYOSLID:10 
LNCipedia gene ID: MYOSLID
Location (hg19): chr2:208103708-208113384
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3733 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT076595
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 37.5216 non-coding 
CPAT coding probability 8.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MYOSLID:10 no no no no

Available literature

  1. Zhao (2016), MYOSLID Is a Novel Serum Response Factor-Dependent Long Noncoding RNA That Amplifies the Vascular Smooth Muscle Differentiation Program., Arterioscler. Thromb. Vasc. Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CPO-5:3
4.0 lnc-CPO-5:3
4.1 lnc-CPO-5:3
5.0 lnc-CPO-5:3
5.1 MYOSLID:2
5.2 MYOSLID:10