Transcript: MYOSLID:11

Basic information

LNCipedia transcript ID: MYOSLID:11 
LNCipedia gene ID: MYOSLID
Location (hg19): chr2:208104255-208117923
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4902 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229647.1|FTMT20700014568.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 37.5216 non-coding 
CPAT coding probability 7.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MYOSLID:11 no no no no

Available literature

  1. Zhao (2016), MYOSLID Is a Novel Serum Response Factor-Dependent Long Noncoding RNA That Amplifies the Vascular Smooth Muscle Differentiation Program., Arterioscler. Thromb. Vasc. Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CPO-5:4
5.0 lnc-CPO-5:4
5.1 MYOSLID:3
5.2 MYOSLID:11