Transcript: NALT1:26

Basic information

LNCipedia transcript ID: NALT1:26 
LNCipedia gene ID: NALT1
Location (hg19): chr9:139442062-139444826
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1800 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237886.1|FTMT23500023911.1
Alternative gene names: TCONS_l2_00029132


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -38.667 non-coding 
CPAT coding probability 22.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NALT1:26 no no no no

Available literature

  1. Wang (2015), LncRNA NALT interaction with NOTCH1 promoted cell proliferation in pediatric T cell acute lymphoblastic leukemia., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 NALT1:26
5.0 NALT1:26
5.1 NALT1:26
5.2 NALT1:26