Transcript: NALT1:7

Basic information

LNCipedia transcript ID: NALT1:7 
LNCipedia gene ID: NALT1
Location (hg19): chr9:139443192-139444187
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 673 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT135554
Alternative gene names: TCONS_l2_00029132


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.7002 non-coding 
CPAT coding probability 37.17% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
NALT1:7 no no no no

Available literature

  1. Wang (2015), LncRNA NALT interaction with NOTCH1 promoted cell proliferation in pediatric T cell acute lymphoblastic leukemia., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf163-2:6
4.0 NALT1:7
4.1 NALT1:7
5.0 NALT1:7
5.1 NALT1:7
5.2 NALT1:7