Transcript: NAV2-AS2:2

Basic information

LNCipedia transcript ID: NAV2-AS2:2 
HGNC Gene Symbol: NAV2-AS2    
HGNC Full Gene Name: NAV2 antisense RNA 2
Ensembl Gene ID: ENSG00000254453
Ensembl Transcript ID: ENST00000533767
Location (hg19): chr11:20065392-20070849
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 782 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000533767.1; NAV2-AS2-001; OTTHUMT00000394495.1
Alternative gene names: ENSG00000254453.1; NAV2-AS2; OTTHUMG00000167397.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 419.6693 coding 
CPAT coding probability 21.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
NAV2-AS2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DBX1-2:1
4.0 NAV2-AS2:2
4.1 NAV2-AS2:2
5.0 NAV2-AS2:2
5.1 NAV2-AS2:2
5.2 NAV2-AS2:2