Transcript: NAV2-AS2:3

Basic information

LNCipedia transcript ID: NAV2-AS2:3 
LNCipedia gene ID: NAV2-AS2
RefSeq ID: NR_046672
Location (hg19): chr11:20065321-20070849
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 853 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_046672; NR_046672.1
Alternative gene names: ; NAV2-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 419.6693 coding 
CPAT coding probability 21.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
NAV2-AS2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DBX1-2:3
4.0 NAV2-AS2:3
4.1 NAV2-AS2:3
5.0 NAV2-AS2:3
5.1 NAV2-AS2:3
5.2 NAV2-AS2:3