Transcript: NAV2-AS5:2

Basic information

LNCipedia transcript ID: NAV2-AS5:2 
LNCipedia gene ID: NAV2-AS5
Location (hg19): chr11:19524220-19528776
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3306 bp
Exons: 3
Sources: Refseq - Dec 2014
Alternative transcript names: NR_049725
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.9309 non-coding 
CPAT coding probability 8.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NAV2-AS5:2 yes no no no

Available literature

  1. Yu (2015), Glucocorticoids Significantly Influence the Transcriptome of Bone Microvascular Endothelial Cells of Human Femoral Head., Chin. Med. J.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-E2F8-1:3
4.0 NAV2-AS5:2
4.1 NAV2-AS5:2
5.0 NAV2-AS5:2
5.1 NAV2-AS5:2
5.2 NAV2-AS5:2