Transcript: NCAM1-AS1:3

Basic information

LNCipedia transcript ID: NCAM1-AS1:3 
LNCipedia gene ID: NCAM1-AS1
RefSeq ID: NR_034101
Location (hg19): chr11:113140254-113144623
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 713 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT024239; NR_034101; NR_034101.1
Alternative gene names: ; NCAM1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 242.4666 coding 
CPAT coding probability 26.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
NCAM1-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DRD2-2:4
4.0 NCAM1-AS1:3
4.1 NCAM1-AS1:3
5.0 NCAM1-AS1:3
5.1 NCAM1-AS1:3
5.2 NCAM1-AS1:3