Transcript: NIFK-AS1:24

Basic information

LNCipedia transcript ID: NIFK-AS1:24 
LNCipedia gene ID: NIFK-AS1
Location (hg19): chr2:122407224-122451087
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 39498 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236859.2|ENCT00000229150.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 40.0472 non-coding 
CPAT coding probability 23.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NIFK-AS1:24 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 NIFK-AS1:24
5.0 NIFK-AS1:24
5.1 NIFK-AS1:24
5.2 NIFK-AS1:24