Transcript: NNT-AS1:10

Basic information

LNCipedia transcript ID: NNT-AS1:10 
LNCipedia gene ID: NNT-AS1
Location (hg19): chr5:43571690-43577858
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6169 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1120:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.5768 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NNT-AS1:10 no no no no

Available literature

  1. Hua (2017), Highly expressed long non-coding RNA NNT-AS1 promotes cell proliferation and invasion through Wnt/β-catenin signaling pathway in cervical cancer., Biomed. Pharmacother.
  2. Wang (2017), Upregulated NNT-AS1, a long noncoding RNA, contributes to proliferation and migration of colorectal cancer cells in vitro and in vivo., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 NNT-AS1:10
4.1 NNT-AS1:10
5.0 NNT-AS1:10
5.1 NNT-AS1:10
5.2 NNT-AS1:10