Transcript: NNT-AS1:20

Basic information

LNCipedia transcript ID: NNT-AS1:20 
LNCipedia gene ID: NNT-AS1
Location (hg19): chr5:43579232-43603206
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 498 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000248092.3|ENST00000500258.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -96.9361 non-coding 
CPAT coding probability 2.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NNT-AS1:20 no no no no

Available literature

  1. Hua (2017), Highly expressed long non-coding RNA NNT-AS1 promotes cell proliferation and invasion through Wnt/β-catenin signaling pathway in cervical cancer., Biomed. Pharmacother.
  2. Wang (2017), Upregulated NNT-AS1, a long noncoding RNA, contributes to proliferation and migration of colorectal cancer cells in vitro and in vivo., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 NNT-AS1:20
5.0 NNT-AS1:20
5.1 NNT-AS1:20
5.2 NNT-AS1:20