Transcript: NRAV:2

Basic information

LNCipedia transcript ID: NRAV:2 
LNCipedia gene ID: NRAV
Location (hg19): chr12:120925270-120933793
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4812 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA334:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.2034 non-coding 
CPAT coding probability 9.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NRAV:2 no no no no

Available literature

  1. Ouyang (2014), NRAV, a long noncoding RNA, modulates antiviral responses through suppression of interferon-stimulated gene transcription., Cell Host Microbe
  2. van Heesch (2014), Extensive localization of long noncoding RNAs to the cytosol and mono- and polyribosomal complexes., Genome Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 NRAV:2
4.1 NRAV:2
5.0 NRAV:2
5.1 NRAV:2
5.2 NRAV:2