Transcript: OGFR-AS1:3

Basic information

LNCipedia transcript ID: OGFR-AS1:3 
LNCipedia gene ID: OGFR-AS1
Location (hg19): chr20:61430693-61433416
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1875 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT080789
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.4157 non-coding 
CPAT coding probability 50.40% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
OGFR-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TCFL5-1:3
4.0 OGFR-AS1:3
4.1 OGFR-AS1:3
5.0 OGFR-AS1:3
5.1 OGFR-AS1:3
5.2 OGFR-AS1:3