Transcript: OTUD6B-AS1:2

Basic information

LNCipedia transcript ID: OTUD6B-AS1:2 
HGNC Gene Symbol: OTUD6B-AS1    
HGNC Full Gene Name: OTUD6B antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000253738
Ensembl Transcript ID: ENST00000524003
RefSeq ID: NR_110439
Location (hg19): chr8:92080139-92082417
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2171 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000524003.1; GS1-251I9.4-001; OTTHUMT00000376787.1; NR_110439.1
Alternative gene names: ENSG00000253738.1; GS1-251I9.4; OTTHUMG00000164022.1; OTUD6B-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -138.584 non-coding 
CPAT coding probability 3.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
OTUD6B-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM55A-2:1
4.0 OTUD6B-AS1:2
4.1 OTUD6B-AS1:2
5.0 OTUD6B-AS1:2
5.1 OTUD6B-AS1:2
5.2 OTUD6B-AS1:2