Transcript: OVCH1-AS1:4

Basic information

LNCipedia transcript ID: OVCH1-AS1:4 
HGNC Gene Symbol: OVCH1-AS1    
HGNC Full Gene Name: OVCH1 antisense RNA 1
Ensembl Gene ID: ENSG00000257599
Ensembl Transcript ID: ENST00000551108
Location (hg19): chr12:29542227-29640221
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 963 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000551108.1
Alternative gene names: ENSG00000257599.1; OVCH1-AS1; ; ENSG00000257599.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -156.6865 non-coding 
CPAT coding probability 52.07% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
OVCH1-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 OVCH1-AS1:4
4.1 OVCH1-AS1:4
5.0 OVCH1-AS1:4
5.1 OVCH1-AS1:4
5.2 OVCH1-AS1:4