Transcript: PACRG-AS1:1

Basic information

LNCipedia transcript ID: PACRG-AS1:1 
HGNC Gene Symbol: PACRG-AS1    
HGNC Full Gene Name: PACRG antisense RNA 1
Ensembl Gene ID: ENSG00000281692
Ensembl Transcript ID: ENST00000626335
Location (hg19): chr6:163731017-163745562
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2192 bp
Exons: 6
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000626335.1
Alternative gene names: ENSG00000281692.1; PACRG-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -148.3883 non-coding 
CPAT coding probability 9.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PACRG-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 PACRG-AS1:1
4.1 PACRG-AS1:1
5.0 PACRG-AS1:1
5.1 PACRG-AS1:1
5.2 PACRG-AS1:1