Transcript: PACRG-AS1:4

Basic information

LNCipedia transcript ID: PACRG-AS1:4 
LNCipedia gene ID: PACRG-AS1
Location (hg19): chr6:163739466-163744897
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1112 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT115956
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -128.7935 non-coding 
CPAT coding probability 6.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PACRG-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL078585.1-11:3
4.0 PACRG-AS1:4
4.1 PACRG-AS1:4
5.0 PACRG-AS1:4
5.1 PACRG-AS1:4
5.2 PACRG-AS1:4