Transcript: PACRG-AS3:1

Basic information

LNCipedia transcript ID: PACRG-AS3:1 
LNCipedia gene ID: PACRG-AS3
RefSeq ID: NR_122120
Location (hg19): chr6:163602677-163613034
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2204 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_122120; NR_122120.1
Alternative gene names: ; PACRG-AS3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -121.6159 non-coding 
CPAT coding probability 2.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PACRG-AS3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PARK2-2:2
4.0 PACRG-AS3:1
4.1 PACRG-AS3:1
5.0 PACRG-AS3:1
5.1 PACRG-AS3:1
5.2 PACRG-AS3:1