Transcript: PAQR9-AS1:13

Basic information

LNCipedia transcript ID: PAQR9-AS1:13 
HGNC Gene Symbol: PAQR9-AS1    
HGNC Full Gene Name: PAQR9 antisense RNA 1
Ensembl Gene ID: ENSG00000241570
Ensembl Transcript ID: ENST00000593321
Location (hg19): chr3:142683339-142686308
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 699 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT092510; ENST00000593321.1; ENST00000593321.5
Alternative gene names: ENSG00000241570.4; RP11-372E1.6; ENSG00000241570.8; PAQR9-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.4656 non-coding 
CPAT coding probability 4.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PAQR9-AS1:13 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-U2SURP-2:11
4.0 PAQR9-AS1:13
4.1 PAQR9-AS1:13
5.0 PAQR9-AS1:13
5.1 PAQR9-AS1:13
5.2 PAQR9-AS1:13