Transcript: PAXBP1-AS1:13

Basic information

LNCipedia transcript ID: PAXBP1-AS1:13 
LNCipedia gene ID: PAXBP1-AS1
RefSeq ID: NR_038880
Location (hg19): chr21:34100425-34105227
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2946 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_038880.1
Alternative gene names: PAXBP1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.9905 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PAXBP1-AS1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 PAXBP1-AS1:13
5.1 PAXBP1-AS1:13
5.2 PAXBP1-AS1:13