Transcript: PAXBP1-AS1:8

Basic information

LNCipedia transcript ID: PAXBP1-AS1:8 
LNCipedia gene ID: PAXBP1-AS1
Location (hg19): chr21:34100426-34105227
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2945 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000238197.1|ENST00000458479.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.9905 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PAXBP1-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PAXBP1-AS1:8
5.0 PAXBP1-AS1:8
5.1 PAXBP1-AS1:8
5.2 PAXBP1-AS1:8