Transcript: PCCA-AS1:1

Basic information

LNCipedia transcript ID: PCCA-AS1:1 
LNCipedia gene ID: PCCA-AS1
Location (hg19): chr13:101132493-101133528
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 420 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT034964
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.1398 non-coding 
CPAT coding probability 3.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PCCA-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-A2LD1-1:4
4.0 PCCA-AS1:1
4.1 PCCA-AS1:1
5.0 PCCA-AS1:1
5.1 PCCA-AS1:1
5.2 PCCA-AS1:1