Transcript: PCDH9-AS2:3

Basic information

LNCipedia transcript ID: PCDH9-AS2:3 
LNCipedia gene ID: PCDH9-AS2
Location (hg19): chr13:67484006-67518119
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 478 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT034214
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -124.0685 non-coding 
CPAT coding probability 2.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PCDH9-AS2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL445989.1-14:3
4.0 PCDH9-AS2:3
4.1 PCDH9-AS2:3
5.0 PCDH9-AS2:3
5.1 PCDH9-AS2:3
5.2 PCDH9-AS2:3