Transcript: PCDH9-AS4:2

Basic information

LNCipedia transcript ID: PCDH9-AS4:2 
LNCipedia gene ID: PCDH9-AS4
RefSeq ID: NR_046637
Location (hg19): chr13:67565018-67576132
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 429 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_046637; NR_046637.1
Alternative gene names: ; PCDH9-AS4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -226.9133 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PCDH9-AS4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL445989.1-16:2
4.0 PCDH9-AS4:2
4.1 PCDH9-AS4:2
5.0 PCDH9-AS4:2
5.1 PCDH9-AS4:2
5.2 PCDH9-AS4:2