Transcript: PCED1B-AS1:25

Basic information

LNCipedia transcript ID: PCED1B-AS1:25 
LNCipedia gene ID: PCED1B-AS1
Location (hg19): chr12:47599685-47610034
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 627 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000247774.2|ENST00000548222.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.6515 non-coding 
CPAT coding probability 23.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PCED1B-AS1:25 no no no no

Available literature

  1. Gu (2015), Aberrant expression of long noncoding RNAs in chronic thromboembolic pulmonary hypertension., Mol Med Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PCED1B-AS1:25
5.0 PCED1B-AS1:25
5.1 PCED1B-AS1:25
5.2 PCED1B-AS1:25