Transcript: PDCD4-AS1:5

Basic information

LNCipedia transcript ID: PDCD4-AS1:5 
LNCipedia gene ID: PDCD4-AS1
Location (hg19): chr10:112628647-112641138
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 10869 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000203497.2|MICT00000048596.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 89.2572 coding 
CPAT coding probability 86.01% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
PDCD4-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PDCD4-AS1:5
5.0 PDCD4-AS1:5
5.1 PDCD4-AS1:5
5.2 PDCD4-AS1:5