Transcript: PDZRN3-AS1:8

Basic information

LNCipedia transcript ID: PDZRN3-AS1:8 
LNCipedia gene ID: PDZRN3-AS1
Location (hg19): chr3:73674076-73677154
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3079 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT090483
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.1232 non-coding 
CPAT coding probability 1.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PDZRN3-AS1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPP4R2-1:5
4.0 PDZRN3-AS1:8
4.1 PDZRN3-AS1:8
5.0 PDZRN3-AS1:8
5.1 PDZRN3-AS1:8
5.2 PDZRN3-AS1:8