Transcript: PGM5P3-AS1:15

Basic information

LNCipedia transcript ID: PGM5P3-AS1:15 
LNCipedia gene ID: PGM5P3-AS1
RefSeq ID: NR_121189
Location (hg19): chr9:72690-75298
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 544 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121189.1
Alternative gene names: PGM5P3-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -45.6096 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PGM5P3-AS1:15 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 PGM5P3-AS1:15
5.1 PGM5P3-AS1:15
5.2 PGM5P3-AS1:15