Transcript: PGM5P4-AS1:13

Basic information

LNCipedia transcript ID: PGM5P4-AS1:13 
LNCipedia gene ID: PGM5P4-AS1
Location (hg19): chr2:114297621-114300267
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 690 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231943.3|FTMT20500048975.1
Alternative gene names: FAM233C


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -45.0808 non-coding 
CPAT coding probability 1.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PGM5P4-AS1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PGM5P4-AS1:13
5.0 PGM5P4-AS1:13
5.1 PGM5P4-AS1:13
5.2 PGM5P4-AS1:13