Transcript: PGM5P4-AS1:2

Basic information

LNCipedia transcript ID: PGM5P4-AS1:2 
LNCipedia gene ID: PGM5P4-AS1
RefSeq ID: NR_121185
Location (hg19): chr2:114286224-114300267
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 950 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121185; NR_121185.1
Alternative gene names: FAM233C; PGM5P4-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -17.3139 non-coding 
CPAT coding probability 11.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PGM5P4-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC016745.1-1:7
4.0 PGM5P4-AS1:2
4.1 PGM5P4-AS1:2
5.0 PGM5P4-AS1:2
5.1 PGM5P4-AS1:2
5.2 PGM5P4-AS1:2