Transcript: PGM5P4-AS1:3

Basic information

LNCipedia transcript ID: PGM5P4-AS1:3 
LNCipedia gene ID: PGM5P4-AS1
RefSeq ID: NR_121187
Location (hg19): chr2:114297606-114300267
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 585 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121187; NR_121187.1
Alternative gene names: FAM233C; PGM5P4-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -50.0932 non-coding 
CPAT coding probability 1.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PGM5P4-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC016745.1-1:6
4.0 PGM5P4-AS1:3
4.1 PGM5P4-AS1:3
5.0 PGM5P4-AS1:3
5.1 PGM5P4-AS1:3
5.2 PGM5P4-AS1:3