Transcript: PHEX-AS1:2

Basic information

LNCipedia transcript ID: PHEX-AS1:2 
LNCipedia gene ID: PHEX-AS1
RefSeq ID: NR_046639
Location (hg19): chrX:22180849-22191100
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1907 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT136477; NR_046639; NR_046639.1
Alternative gene names: ; PHEX-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.5954 non-coding 
CPAT coding probability 2.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PHEX-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SMPX-1:2
4.0 PHEX-AS1:2
4.1 PHEX-AS1:2
5.0 PHEX-AS1:2
5.1 PHEX-AS1:2
5.2 PHEX-AS1:2