Transcript: PIK3IP1-AS1:11

Basic information

LNCipedia transcript ID: PIK3IP1-AS1:11 
LNCipedia gene ID: PIK3IP1-AS1
Location (hg19): chr22:31703844-31706049
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2050 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT084875; FPKM1_group_20435_transcript_4
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.164 non-coding 
CPAT coding probability 3.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PIK3IP1-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LIMK2-2:1
4.0 lnc-LIMK2-2:1
4.1 PIK3IP1-AS1:11
5.0 PIK3IP1-AS1:11
5.1 PIK3IP1-AS1:11
5.2 PIK3IP1-AS1:11