Transcript: PITPNA-AS1:1

Basic information

LNCipedia transcript ID: PITPNA-AS1:1 
LNCipedia gene ID: PITPNA-AS1
RefSeq ID: NR_028514
Location (hg19): chr17:1420213-1421390
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 554 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_028514; NR_028514.1
Alternative gene names: ; PITPNA-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -154.0606 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PITPNA-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDR81-1:2
4.0 PITPNA-AS1:1
4.1 PITPNA-AS1:1
5.0 PITPNA-AS1:1
5.1 PITPNA-AS1:1
5.2 PITPNA-AS1:1