Transcript: PITPNA-AS1:4

Basic information

LNCipedia transcript ID: PITPNA-AS1:4 
LNCipedia gene ID: PITPNA-AS1
Location (hg19): chr17:1420219-1421390
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 548 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236618.2|ENST00000425081.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -154.0606 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PITPNA-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PITPNA-AS1:4
5.0 PITPNA-AS1:4
5.1 PITPNA-AS1:4
5.2 PITPNA-AS1:4