Transcript: PKIA-AS1:1

Basic information

LNCipedia transcript ID: PKIA-AS1:1 
HGNC Gene Symbol: PKIA-AS1    
HGNC Full Gene Name: PKIA antisense RNA 1
Ensembl Gene ID: ENSG00000254266
Ensembl Transcript ID: ENST00000522302
RefSeq ID: NR_125389
Location (hg19): chr8:79446127-79470738
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2011 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000522302; ENST00000522302.1; RP11-594N15.2-001; OTTHUMT00000379418.1; NONHSAT127365; NR_125389; ENST00000522302.5; NR_125389.1
Alternative gene names: ENSG00000254266; RP11-594N15.2; ENSG00000254266.1; OTTHUMG00000164617.1; ENSG00000254266.5; PKIA-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.6948 non-coding 
CPAT coding probability 5.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PKIA-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IL7-1:1
3.1 lnc-IL7-1:1
4.0 PKIA-AS1:1
4.1 PKIA-AS1:1
5.0 PKIA-AS1:1
5.1 PKIA-AS1:1
5.2 PKIA-AS1:1